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Fwd: Emailing - Ruth Davidson.pdf
by Michael Charleston 19 Oct '17

19 Oct '17

Dear all, please see below an announcement for a pretty interesting talk to be presented by our visitor, Ruth Davidson. Do come along! University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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Fwd: AMSI BIS 17 | Public Lecture Poster
by Michael Charleston 17 Oct '17

17 Oct '17

University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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Fwd: Seminar on genome editing and improved ES gene targeting mice
by Michael Charleston 13 Oct '17

13 Oct '17

Dear all, this might be of interest – the conferences are in Sydney. (Also don’t forget to register for Phylomania<http://www.maths.utas.edu.au/phylomania/phylomania2017.htm> and the Australasian Evolution Society conferences<https://aesconference2017.wordpress.com/>!) Cheers Mike Begin forwarded message: From: Alfred Akateh <info(a)research.cyagenbio.com<mailto:info@research.cyagenbio.com>> Subject: Seminar on genome editing and improved ES gene targeting mice Date: 12 October 2017 at 4:59:17 pm AEDT To: <byeong.kang(a)utas.edu.au<mailto:byeong.kang@utas.edu.au>> Reply-To: <cyagenapac(a)gmail.com<mailto:cyagenapac@gmail.com>> Dear Professor , This is Alfred Akateh from Cyagen Biosciences. I'd like to inform you that a team of mouse model experts from Cyagen Biosciences will visit Australia and New Zealand from November 20 – December 10, 2017. During this trip, we'll attend the 3rd Oceania Mouse Transgenic & Assisted Reproduction Technologies Symposium and the 37th Annual Scientific Meeting of the Australasian Neuroscience Association. If you happen to be there, please stop by our booth for a brief introduction. Our Vice President of Technologies, Dr Marvin Ouyang, will be there to answer all your questions. In order to make the best use of our short stay in Australia and New Zealand, we're looking to organize a couple of technical seminars to explain our core technologies and services. Having read through your profile on your department website, I'm tempted to believe that this could be of use to you and your colleagues. I'd like to know if you can host a technical seminar for your team or department. If a seminar is too difficult to squeeze in, please let us know if a one-to-one visit is possible. Looking forward to hear from you soon. Best regards, Territory Sales Manager (Asian Pacific Region) Cyagen Biosciences Inc. 2255 Martin Ave., Suite E Santa Clara, CA 95050 www.cyagen.com<http://image.trustmta.com/t/459b9701/4eef/4074/bbf4/d8e617fbcf0b/2394392-10…> If you do not wish to receive these emails, please Unsubscribe<http://image.trustmta.com/t/zz?t=4F8075B3-DE3C-4CC2-9645-82C75463318F&STARI…> or reply with "Remove". University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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Phylomania 2017
by Michael Charleston 25 Sep '17

25 Sep '17

Hello! If there’s anyone out there who hasn’t yet heard of phylogenetics, or didn’t know that the University of Tasmania is the home of the strongest group of researchers working on it in Australia, well… you need to get out more. In particular, you need to get out to phylogenetics conferences! Oh look – here’s one: This is a call to register to attend Phylomania 2017 - The 9th Annual conference of the UTAS Theoretical Phylogenetics group, to be held 6th-8th December in Hobart, Tasmania. This year it will be combined with the 2017 Australasian Evolution Society meeting<https://aesconference2017.wordpress.com/>, running from 4th to 6th December. Yes, there’s a deliberate day of overlap (including the combined conference dinner). Phylomania (and the AES meeting) will be held within the School of Physical Sciences at the Sandy Bay campus of the University of Tasmania. The meeting will bring together mathematicians and biologists to discuss current research in phylogenetics and related areas. If your presentation is likely to also suit the AES audience then you can indicate that you’d like it to be considered for that combined day, when you register. There’s also a place there for you to enter an abstract: if you do, use normal text, html, or LaTeX. If you only have a (rough!) title just now that’s fine, you can update us with more information closer to the conference. You can bring a talk, or a poster, or both! All the details and some pertinent local information can be found at the meeting website http://www.maths.utas.edu.au/phylomania/phylomania2017.htm. General registration is set at $175, with a reduced rate of $120 for students, to cover catering. The conference dinner is $75. The AES has the same costing, and there’s a discount rate for the whole combined conference of $300 ($200 for students). To register please use the form on the website given above, and payment is through that page too. Please do feel free to forward this announcement to others who may be interested in attending — the more the merrier! Best wishes, Mike Charleston and the Theoretical Phylogenetics Group<http://www.maths.utas.edu.au/People/Holland/theoreticalPhylogenetics.htm> Michael Charleston Associate Professor in Bioinformatics Co-director of Data, Knowledge and Decisions Research Theme Head of UTAS node of EMBL-ABR School of Physical Sciences University of Tasmania AUSTRALIA phone: +61 3 6226 2444 p.s. Phylogenetics is the discipline of uncovering the evolutionary relationships among species back in time, from data that we observe in the present. It’s a statistical process, involving groovy maths and big computers, and it has massive importance in biology – it’s the statistical framework to compare species, after all. University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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Fwd: National Research Collections Australia (NCRA) PhD top-up scholarship
by Michael Charleston 21 Sep '17

21 Sep '17

An interesting looking PhD project with top-up scholarship: National Research Collections Australia (NRCA) top-up scholarship: A molecular view of Australian biodiversity - exploring insect genomes for major shifts in functional genes<http://cba.anu.edu.au/opportunities/student-research/projects-opportunities…> CSIRO’s collections<https://www.csiro.au/en/Research/Collections> are vast storehouses of information about Australia’s biodiversity. These world-class repositories provide base-line data against which modern observations can be compared making them essential for taxonomic, genetic, agricultural and ecological research, and conservation and resource management. Starting in 2018, this PhD project will use CSIRO’s collection resources in combination with DNA barcodes, Whole Genome Shotgun sequences and 600 recently sequenced transcriptomes to build the tree of life for selected Australian insect groups, exploring genomes for functional genes within this evolutionary context. The student will be located in Canberra at the Australian National Insect Collection<https://www.csiro.au/en/Research/Collections/ANIC> (co-superviser Dr Andreas Zwick) and the Research School of Biology<http://biology.anu.edu.au/> at the Australian National University (co-superviser Prof Craig Moritz). This CSIRO National Research Collections top-up scholarship will award $7,000pa stipend and $10,000pa operating. Please see here<http://cba.anu.edu.au/opportunities/student-research/projects-opportunities…> for more information about the project, supervisor details and how to apply. Applications close 31 October. [cid:FD20DB4D-BFA6-4DCE-A791-7F43959907E2@uds.anu.edu.au] Michael Charleston Associate Professor in Bioinformatics Co-director of Data, Knowledge and Decisions Research Theme Head of UTAS node of EMBL-ABR School of Physical Sciences University of Tasmania AUSTRALIA phone: +61 3 6226 2444 University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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Single cell sequencing workshop or Gene-editing symposium? And late breaking awards!
by Jac Charlesworth 14 Sep '17

14 Sep '17

As part of the upcoming Australasian Genomics conference<http://agtaconference.org/> being held in Hobart Oct 29-Nov 1st there are two pre-conference workshops that are open to local participants for $40 (or $20 for students). Choose between a Gene-Editing Symposium or a Single Cell Sequencing workshop. Both include great speakers as well as food! The workshops are concurrent on Sunday the 29th of October, prior to the official conference opening. More info can be found here: http://agtaconference.org/pre-conference-workshops/ Also, AGTA have announced three 'late-breaking' awards for posters submitted to AGTA17 between now and September 22nd - so if you have some interesting genomics to showcase now is the time to submit! More info on the awards at: http://agtaconference.org/late-breaking-poster-awards/ There's registration discounts for members and groups of three or more. Or you can just contact me if you want info on any of it! Best wishes, Jac Dr Jac Charlesworth Senior Research Fellow - Computational Genomics Menzies Institute for Medical Research University of Tasmania p 6226 4607 | m 0424 709 440 | f 6226 7704 17 Liverpool St (Private Bag 23) Hobart TAS 7001 | www.menzies.utas.edu.au<http://www.menzies.utas.edu.au/> Convenor of #AGTA17 | agtaconference.org<http://agtaconference.org/> [AGTA-email-banner]<http://agtaconference.org/> University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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Asking help on Gene set Enrichment
by Raihan Mahmud 23 Aug '17

23 Aug '17

Dear All, I am a student of IMAS Taroona working with a set of gene expression data. I was wondering if anyone can help me on gene ontology analysis/pathway enrichment analysis. Specifically, I am having difficulties to import g:profiler output data into Cytoscape. Please let me know if anyone is working with g:Profiler (Or DAVID/ GO) and Cytoscape (especially-EnrichmentMap/BiNGO/ENViz or any plugins in that regards)? Thank you very much for your time and help. Regards, Raihan University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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Amazing genomics conference here in Tasmania - Early Bird Closing Monday | Updated Program Available
by Jac Charlesworth 02 Aug '17

02 Aug '17

Hi, I’m circulating this on to the list because it is local, earlybird closes Monday, there’s group registration options, posters are still open and it’ll be a great conference. Rego is even cheaper for AGTA members (and membership is cheap and worth having if you’re into genomics). There are also two pre-conference workshops being held on the 29th of October that are open to non-conference attendees – one on single-cell sequencing and a gene editing symposium. Those are $40 for general and $20 for students and worth going to one! Pass it on! View this email in your browser<http://mail.eventsairmail.com/wf/click?upn=leXlJNbV2Nqtn2a5oly5SAre39JNF5xm…> [https://gallery.mailchimp.com/8e6c7f581a1a22c544246ccdc/images/1adf3c91-d21…]<http://mail.eventsairmail.com/wf/click?upn=P9Z9BSJktgtsb-2BzdM0xrq70ga27JWB…> [https://gallery.mailchimp.com/8e6c7f581a1a22c544246ccdc/images/02c218b1-942…]<http://mail.eventsairmail.com/wf/click?upn=6Z1aqJiIYyZxRAXwtKR5r8X7jDDQ1hum…> Standard fees will apply from 5pm, Monday 7 August 10% Group Registration Discount 3+ attending from the same organisation? Don't forget to register through the group registration portal to receive a 10% discount off each registration. CLICK HERE TO REGISTER FOR AGTA 2017<http://mail.eventsairmail.com/wf/click?upn=6Z1aqJiIYyZxRAXwtKR5r8X7jDDQ1hum…> AGTA17 CONFERENCE DINNER [https://gallery.mailchimp.com/8e6c7f581a1a22c544246ccdc/images/aa7496a3-2b2…] The highlight of the social program will take place at Mona (Museum of Old and New Art). You'll experience a ride on the Mona Roma ferry, followed by a private museum viewing and dinner at Eros and Thanatos. This conference dinner will undoubtedly be one to remember! UPDATED PROGRAM AVAILABLE The reviews are in and we would like to thank all authors who submitted an abstract for consideration in the program. Congratulations again to all those who were successful! CLICK HERE TO VIEW THE PROGRAM<http://mail.eventsairmail.com/wf/click?upn=6Z1aqJiIYyZxRAXwtKR5r8X7jDDQ1hum…> PRE-CONFERENCE WORKSHOPS Tickets to can be purchased when registering online for AGTA17. If you are not attending the conference and wish to attend a workshop, please contact Emma<mailto:emma@laevents.com.au>. Delegate Ticket - $40 Student Ticket - $20 Can Genome Editing Fulfil Its Promise in the Clinic and the Field? Symposium Speakers Alex Hewitt, University of Tasmania Alice Pébay, The University of Melbourne Dianne Nicol, University of Tasmania Kaylene Young, University of Tasmania Margaret Otlowski, University of Tasmania (Mediator) Owain Edwards, CSIRO VIEW THE SYMPOSIUM PROGRAM<http://mail.eventsairmail.com/wf/click?upn=6Z1aqJiIYyZxRAXwtKR5r8X7jDDQ1hum…> Technical Solutions to Single Cell Problems Workshop Speakers Brian Fritz, 10X David Gallego-Ortega, Garvan Institute of Medical Research Mark Lynch, Fluidigm Shalin Naik, Walter and Eliza Hall Institute of Medical Research Marina Oliva, University of Western Australia Alicia Oshlack, Murdoch Childrens Research Institute Joseph Powell, The University of Queensland VIEW THE WORKSHOP PROGRAM<http://mail.eventsairmail.com/wf/click?upn=6Z1aqJiIYyZxRAXwtKR5r8X7jDDQ1hum…> [https://gallery.mailchimp.com/8e6c7f581a1a22c544246ccdc/images/6110b600-d74…]<http://mail.eventsairmail.com/wf/click?upn=6Z1aqJiIYyZxRAXwtKR5r8X7jDDQ1hum…> [https://cdn-images.mailchimp.com/icons/social-block-v2/color-twitter-48.png]<http://mail.eventsairmail.com/wf/click?upn=ixLt52LWCFyq2nS3RXiMSDQhZMpMj7uV…> @agtaGenomics #AGTA17<http://mail.eventsairmail.com/wf/click?upn=ixLt52LWCFyq2nS3RXiMSDQhZMpMj7uV…> [https://cdn-images.mailchimp.com/icons/social-block-v2/color-facebook-48.png]<http://mail.eventsairmail.com/wf/click?upn=ixLt52LWCFyq2nS3RXiMSHdtVJiabJFT…> agtaconference<http://mail.eventsairmail.com/wf/click?upn=ixLt52LWCFyq2nS3RXiMSHdtVJiabJFT…> [https://cdn-images.mailchimp.com/icons/social-block-v2/color-link-48.png]<http://mail.eventsairmail.com/wf/click?upn=P9Z9BSJktgtsb-2BzdM0xrq70ga27JWB…> agtaconference.org<http://mail.eventsairmail.com/wf/click?upn=P9Z9BSJktgtsb-2BzdM0xrq70ga27JWB…> [https://gallery.mailchimp.com/8e6c7f581a1a22c544246ccdc/images/06bf7001-714…]<mailto:emma@laevents.com.au?subject=AGTA%202017> This email was sent by Leishman Associates, Conference & Event Management, 227 Collins Street, Hobart, TAS, 7000 on behalf of the organisers of the above mentioned conference. As the recipient you have received this notice as a past delegate or potential delegate of the above mentioned conference. University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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Fwd: A 3-year postdoc in genomics at CSIRO. Hobart
by Michael Charleston 31 Jul '17

31 Jul '17

Michael Charleston Associate Professor in Bioinformatics Co-director of Data, Knowledge and Decisions Research Theme Head of UTAS node of EMBL-ABR School of Physical Sciences University of Tasmania AUSTRALIA phone: +61 3 6226 2444 Begin forwarded message: From: Larry Forbes <larry.forbes(a)utas.edu.au<mailto:larry.forbes@utas.edu.au>> Subject: A 3-year postdoc in genomics at CSIRO. Hobart Date: 29 July 2017 at 5:37:23 PM AEST To: Mathematics & Physics - All <SET-DL-Maths-And-Physics-All(a)utas.ad.internal<mailto:SET-DL-Maths-And-Physics-All@utas.ad.internal>> Another job! Might be worth a look. Here is the website: https://jobs.csiro.au/job/Hobart%2C-TAS-Postdoctoral-Fellowship-Microbial-E… Cheers, Larry F. University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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Fwd: A job as a Population Dynamicist, CSIRO, Hobart
by Michael Charleston 31 Jul '17

31 Jul '17

Michael Charleston Associate Professor in Bioinformatics Co-director of Data, Knowledge and Decisions Research Theme Head of UTAS node of EMBL-ABR School of Physical Sciences University of Tasmania AUSTRALIA phone: +61 3 6226 2444 Begin forwarded message: From: Larry Forbes <larry.forbes(a)utas.edu.au<mailto:larry.forbes@utas.edu.au>> Subject: A job as a Population Dynamicist, CSIRO, Hobart Date: 29 July 2017 at 5:35:02 PM AEST To: Mathematics & Physics - All <SET-DL-Maths-And-Physics-All(a)utas.ad.internal<mailto:SET-DL-Maths-And-Physics-All@utas.ad.internal>> Dear All: Here is the website for that Job Ad. https://jobs.csiro.au/job/Hobart%2C-TAS-Population-Dynamicist/417405800/ This may be of interest! Cheers, Larry F. University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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